Doc umentation on how to run pipelines

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I was approached by Suhn today, she was needing to run a bisulfite pipeline 
from our pipelines selection. 
Where can I learn about how to run a pipeline? I would like to learn about the 
specific too. Any tips and tricks about it? Something that I should know before 
running it?

Original issue reported on code.google.com by natalia....@gmail.com on 12 Sep 2014 at 10:08

[GoogleCodeExporter]

good point, Charlie, Lijing and I think Vasu know how to do it. Charlie 
probably moreso than  the others.

Original comment by zack...@gmail.com on 13 Sep 2014 at 1:13

• Changed title: Doc umentation on how to run pipelines

[GoogleCodeExporter]

Issue 810 
https://code.google.com/p/usc-epigenome-center/issues/detail?id=809&can=1&colspe
c=ID%20Status%20Priority%20Owner%20Summary%20Modified%20Opened


describes how to run chipseq pipeline

Original comment by natalia....@gmail.com on 16 Sep 2014 at 7:58