Issues

• Investigate missing cases in generateGenoProbs() and its X Chr variant

  AlphaGenes/AlphaImpute2#77 · Filter by author XingerTang opened on Aug 18, 2026
  

• Fix test cross Python version

  task
  AlphaGenes/AlphaImpute2#74 · Filter by author XingerTang opened on Jul 9, 2026
  

• Add option for more than one chromosome

  task
  AlphaGenes/AlphaImpute2#73 · Filter by author XingerTang opened on Jun 26, 2026
  

• Possible improvements in AlphaImpute2

  AlphaGenes/AlphaImpute2#70 · Filter by author XingerTang opened on Jun 10, 2026
  

• Move error to the argument

  AlphaGenes/AlphaImpute2#69 · Filter by author AprilYUZhang opened on Jun 1, 2026
  

• Add metafounders

  AlphaGenes/AlphaImpute2#57 · Filter by author gregorgorjanc opened on Dec 1, 2025

• Possble improvements in segregation outputs

  AlphaGenes/AlphaImpute2#54 · Filter by author XingerTang opened on Nov 28, 2025
  7

• Add output option support

  AlphaGenes/AlphaImpute2#50 · Filter by author XingerTang opened on Nov 13, 2025

• Value of error parameters

  AlphaGenes/AlphaImpute2#45 · Filter by author XingerTang opened on Aug 4, 2025
  1

• Clean the functions that are unused

  documentation
  AlphaGenes/AlphaImpute2#42 · Filter by author XingerTang opened on May 1, 2025
  1

• Output posterior probabilities for alleles and genotypes

  enhancement
  AlphaGenes/AlphaImpute2#25 · Filter by author gregorgorjanc opened on Jul 24, 2023
  1

• What is the status of the code in the recomb_est branch?

  enhancementquestion
  AlphaGenes/AlphaImpute2#18 · Filter by author gregorgorjanc opened on Jul 5, 2023

• Haplotype datatype improvement

  AlphaGenes/AlphaImpute2#16 · Filter by author XingerTang opened on Jun 21, 2023
  41