Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
harvardinformatics
/
scRNAseq-preprocessing
Public
Notifications
You must be signed in to change notification settings
Fork
1
Star
0
Code
Issues
0
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: harvardinformatics/scRNAseq-preprocessing
Actions
All workflows
Workflows
full workflow
full workflow
tests
tests
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
63 workflow runs
63 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Harden downsample_clusters, right-size memory, and improve scalability
tests
#54:
Commit
cf69852
pushed by
adamfreedman
2m 25s
debug
debug
2m 25s
View workflow file
Fix OOM failures and data-driven errors in multi-dataset runs
tests
#53:
Commit
6500511
pushed by
adamfreedman
3m 31s
debug
debug
3m 31s
View workflow file
docs: add How to use section to README, remove Data section
tests
#52:
Commit
4bcbf33
pushed by
adamfreedman
2m 28s
v0.1_beta
v0.1_beta
2m 28s
View workflow file
docs: add How to use section to README, remove Data section
tests
#51:
Commit
4bcbf33
pushed by
adamfreedman
2m 7s
main
main
2m 7s
View workflow file
Merge pull request #11 from harvardinformatics/simplify_dev
tests
#50:
Commit
85d33ab
pushed by
adamfreedman
2m 20s
main
main
2m 20s
View workflow file
Simplify dev
full workflow
#9:
Pull request
#11
opened by
adamfreedman
2h 13m 41s
simplify_dev
simplify_dev
2h 13m 41s
View #11
View workflow file
Simplify dev
tests
#49:
Pull request
#11
opened by
adamfreedman
2m 22s
simplify_dev
simplify_dev
2m 22s
View #11
View workflow file
Make medium-fixture de-dup injective (occurrence-rank rows) and vecto…
tests
#48:
Commit
e3f3357
pushed by
adamfreedman
3m 17s
simplify_dev
simplify_dev
3m 17s
View #11
View workflow file
Fix percent.mt corruption and reintroduced duplicate cells in medium …
tests
#47:
Commit
6a54c78
pushed by
adamfreedman
3m 20s
simplify_dev
simplify_dev
3m 20s
View workflow file
Simplify: dedup test helpers, tighten SCTransform call, sparse jitter…
tests
#46:
Commit
233d034
pushed by
adamfreedman
3m 35s
simplify_dev
simplify_dev
3m 35s
View workflow file
Merge pull request #10 from harvardinformatics/integration_dev
tests
#45:
Commit
dbd07e3
pushed by
adamfreedman
3m 57s
main
main
3m 57s
View workflow file
Integration dev
full workflow
#8:
Pull request
#10
opened by
adamfreedman
2h 15m 13s
integration_dev
integration_dev
2h 15m 13s
View #10
View workflow file
Integration dev
tests
#44:
Pull request
#10
opened by
adamfreedman
3m 21s
integration_dev
integration_dev
3m 21s
View #10
View workflow file
Bump GitHub Actions to Node.js 24 runtime versions
tests
#43:
Commit
1ac5e18
pushed by
adamfreedman
7m 45s
integration_dev
integration_dev
7m 45s
View #10
View workflow file
tests
tests
#42:
Manually run by
adamfreedman
3m 1s
integration_dev
integration_dev
3m 1s
View workflow file
tests
tests
#41:
Manually run by
adamfreedman
4m 14s
integration_dev
integration_dev
4m 14s
View workflow file
Remove remaining stale downsample_cluster_replicate assertions in tes…
tests
#40:
Commit
6876725
pushed by
adamfreedman
2m 49s
integration_dev
integration_dev
2m 49s
View workflow file
Add scaling regression test for downsample_clusters; run all R-execut…
tests
#39:
Commit
0bf9aaa
pushed by
adamfreedman
3m 33s
integration_dev
integration_dev
3m 33s
View workflow file
Explicitly delete per-cluster marker CSVs in combine_markers
tests
#38:
Commit
441d1eb
pushed by
adamfreedman
2m 27s
integration_dev
integration_dev
2m 27s
View workflow file
Fix SCTransform hang and consolidate downsampling replicates into one…
tests
#37:
Commit
519fb72
pushed by
adamfreedman
2m 36s
integration_dev
integration_dev
2m 36s
View workflow file
Integrate downsampling workflow modes
tests
#36:
Commit
a03e43a
pushed by
adamfreedman
3m 1s
integration_dev
integration_dev
3m 1s
View workflow file
Merge pull request #9 from harvardinformatics/fix-fullworkflow-action…
tests
#35:
Commit
a3e07ce
pushed by
adamfreedman
2m 24s
main
main
2m 24s
View workflow file
Allow full workflow test to run without cannon profile
full workflow
#7:
Pull request
#9
synchronize by
adamfreedman
14m 21s
fix-fullworkflow-action-profile
fix-fullworkflow-action-profile
14m 21s
View #9
View workflow file
Allow full workflow test to run without cannon profile
tests
#34:
Pull request
#9
synchronize by
adamfreedman
1m 32s
fix-fullworkflow-action-profile
fix-fullworkflow-action-profile
1m 32s
View #9
View workflow file
Relax neighborhood purity metadata tolerance
tests
#33:
Commit
2da1944
pushed by
adamfreedman
1m 34s
fix-fullworkflow-action-profile
fix-fullworkflow-action-profile
1m 34s
View #9
View workflow file
Previous
1
2
3
Next
You can’t perform that action at this time.