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TemplateFlow

FAIR-sharing of multi-scale, multi-species brain models

TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models

RRID:SCR_021876

Please visit www.templateflow.org for a more comprehensive description of this project. News and some discussions take place at the Nipy discourse platform.

About

Reference anatomies of the brain and corresponding atlases play a central role in experimental neuroimaging workflows and are the foundation for reporting standardized results. The choice of such references —i.e., templates— and atlases is one relevant source of methodological variability across studies, which has recently been brought to attention as an important challenge to reproducibility in neuroscience. TemplateFlow is a publicly available framework for human and nonhuman brain models. The framework combines an open database with software for access, management, and vetting, allowing scientists to distribute their resources under FAIR —findable, accessible, interoperable, reusable— principles. TemplateFlow supports a multifaceted insight into brains across species and enables multiverse analyses testing whether results generalize across standard references, scales, and in the long term, species, thereby contributing to increasing the reliability of neuroimaging results.

TF flowchart

Vision

The rationale behind TemplateFlow and how we envision it as a fundamental instrument for neuroimaging studies is presented in our preprint:

Ciric, R., Thompson, W.H., Lorenz, R. et al. TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models. Nat Methods 19, 1568–1571 (2022). doi:10.1038/s41592-022-01681-2

An extended version of this paper is found in our pre-print.

TF templates

Acknowledgments

This work is steered and maintained by the NiPreps Community. The development of this framework is supported the NIMH (RF1MH121867, RAP, OE).

Thanks to the DataLad developers, as we rely on their excellent tool for managing the TemplateFlow Archive.

OpenDOAR:10204

Pinned Loading

  1. templateflow templateflow Public

    The TemplateFlow Archive - A DataLad super-dataset

    93 16

  2. python-client python-client Public

    A python client to query TemplateFlow via pyBIDS

    Python 8 13

  3. python-manager python-manager Public

    A toolbox to upload and update the TemplateFlow repository

    Python 1 2

Repositories

Showing 10 of 47 repositories
  • python-client Public

    A python client to query TemplateFlow via pyBIDS

    templateflow/python-client’s past year of commit activity
    Python 8 Apache-2.0 13 13 3 Updated Jan 6, 2026
  • templateflow Public

    The TemplateFlow Archive - A DataLad super-dataset

    templateflow/templateflow’s past year of commit activity
    93 16 56 0 Updated Jan 6, 2026
  • tpl-MNI152NLin6Asym Public

    FSL's modified version (Asymmetric) of the MNI ICBM 152 non-linear 6th Generation Symmetric Average Brain Stereotaxic Registration Model

    templateflow/tpl-MNI152NLin6Asym’s past year of commit activity
    Python 4 4 4 0 Updated Jan 6, 2026
  • tpl-MNI152NLin2009cAsym Public

    MNI152NLin2009cAsym

    templateflow/tpl-MNI152NLin2009cAsym’s past year of commit activity
    Python 11 9 9 0 Updated Jan 6, 2026
  • .github Public
    templateflow/.github’s past year of commit activity
    0 CC0-1.0 0 0 0 Updated Jan 6, 2026
  • templateflow.github.io Public

    TemplateFlow landing page

    templateflow/templateflow.github.io’s past year of commit activity
    HTML 3 CC0-1.0 0 1 0 Updated Jan 6, 2026
  • www.templateflow.org Public

    The TemplateFlow Website

    templateflow/www.templateflow.org’s past year of commit activity
    Python 1 Apache-2.0 1 1 0 Updated Jan 6, 2026
  • tpl-WHS Public
    templateflow/tpl-WHS’s past year of commit activity
    Python 0 0 1 0 Updated Nov 13, 2025
  • templateflow/tpl-VALiDATe29’s past year of commit activity
    Python 0 CC-BY-4.0 0 0 0 Updated Nov 13, 2025
  • tpl-UNCInfant Public
    templateflow/tpl-UNCInfant’s past year of commit activity
    Python 0 CC-BY-4.0 0 0 0 Updated Nov 13, 2025

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