Trigger cryoSIM processing#841

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trigger-cryosim-processing

Commits on Jul 14, 2026

Added new router module with an endpoint to submit SIM data processing jobs to RabbitMQ
tieneupin
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Added CryoSIM context to list of Murfey context entry points
tieneupin
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Added new utility module containing shared variables and functions used by the CryoSIM workflow
tieneupin
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Added logic to the Analyser to identify and set CryoSIM context
tieneupin
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Added logic to the CryoSIM context to identify raw data files and submit them for processing
tieneupin
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Forgot to rename logger for cryoSIM API module
tieneupin
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Added test for the 'request_sim_processing' API endpoint
tieneupin
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Updated cryoSIM raw data suffixes
tieneupin
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Added tests for the Analyser for the cryoSIM workflow
tieneupin
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Updated tests for the cryoSIM context to reflect updated functionality
tieneupin
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Sanitise file path
tieneupin
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Put the file endings in the Analyser and SIMContext files directly; Analyser should determine context using bright field files as well, whereas 'capture_post' should only be triggered on fluorescen…
tieneupin
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Updated tests to reflect new behaviour
tieneupin
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Commits on Jul 15, 2026