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analysis: fix getMinNrFluxes crash on all-non-negative scores, drop dead code Tests #433: Pull request #729 opened by edkerk
3m 6s fix/getminnrfluxes-cleanup
fix/getminnrfluxes-cleanup
3m 6s
Revert removal of writeFasta and processProteinFastaFile Tests #432: Pull request #728 opened by edkerk
3m 15s revert/restore-write-fasta
revert/restore-write-fasta
3m 15s
remove: exportToTabDelimited, dead fallback in exportToExcelFormat Tests #431: Pull request #727 synchronize by edkerk
4m 5s remove/export-to-tab-delimited
remove/export-to-tab-delimited
4m 5s
remove: exportToTabDelimited, dead fallback in exportToExcelFormat Tests #430: Pull request #727 opened by edkerk
3m 2s remove/export-to-tab-delimited
remove/export-to-tab-delimited
3m 2s
io: rxnDeltaG/metDeltaG round-trip through SBML Tests #429: Pull request #726 synchronize by edkerk
2m 45s feat/deltag-sbml-roundtrip
feat/deltag-sbml-roundtrip
2m 45s
io: rxnDeltaG/metDeltaG round-trip through SBML Tests #428: Pull request #726 opened by edkerk
2m 53s feat/deltag-sbml-roundtrip
feat/deltag-sbml-roundtrip
2m 53s
remove: followFluxes, dead code fully subsumed by printFluxes + followChanged Tests #427: Pull request #725 opened by edkerk
4m 2s remove/follow-fluxes-dead-code
remove/follow-fluxes-dead-code
4m 2s
manipulation: addTransport handles row-oriented metNames Tests #426: Pull request #723 synchronize by edkerk
4m 1s fix/addtransport-metnames-orientation
fix/addtransport-metnames-orientation
4m 1s
manipulation: addTransport handles row-oriented metNames Tests #425: Pull request #723 opened by edkerk
2m 49s fix/addtransport-metnames-orientation
fix/addtransport-metnames-orientation
2m 49s
io/parseYAML: pure-MATLAB implementation, no Python dependency Tests #424: Pull request #721 opened by edkerk
3m 5s fix/parseyaml-pure-matlab
fix/parseyaml-pure-matlab
3m 5s
docs: remove cross-language and code-history commentary Tests #423: Pull request #720 opened by edkerk
2m 54s docs/remove-cross-language-and-history-comments
docs/remove-cross-language-and-history-comments
2m 54s
annotation: split deltaGCSV into loadDeltaGCSV / saveDeltaGCSV Tests #422: Pull request #719 opened by edkerk
3m 12s fix/deltagcsv-split
fix/deltagcsv-split
3m 12s
manipulation: mergeModels guards against same-batch id-rename collisions Tests #421: Pull request #718 opened by edkerk
3m 37s fix/mergemodels-self-collision
fix/mergemodels-self-collision
3m 37s
io/yaml: preserve unknown metaData annotation fields on write/read Tests #420: Pull request #717 opened by edkerk
2m 44s fix/yaml-metadata-passthrough-extra-fields
fix/yaml-metadata-passthrough-extra-fields
2m 44s
Trim docs and comments to current-state-only prose Tests #419: Pull request #716 synchronize by edkerk
2m 47s docs/trim-to-current-state
docs/trim-to-current-state
2m 47s
Trim docs and comments to current-state-only prose Tests #418: Pull request #716 opened by edkerk
2m 56s docs/trim-to-current-state
docs/trim-to-current-state
2m 56s
writeYAMLmodel: drop empty genes/gene_reaction_rule fields Tests #417: Pull request #715 synchronize by edkerk
3m 36s fix/writeyamlmodel-empty-genes
fix/writeyamlmodel-empty-genes
3m 36s
writeYAMLmodel: drop empty genes/gene_reaction_rule fields Tests #416: Pull request #715 synchronize by edkerk
2m 37s fix/writeyamlmodel-empty-genes
fix/writeyamlmodel-empty-genes
2m 37s
writeYAMLmodel: drop empty genes/gene_reaction_rule fields Tests #415: Pull request #715 opened by edkerk
3m 6s fix/writeyamlmodel-empty-genes
fix/writeyamlmodel-empty-genes
3m 6s
Update HTML documentation Tests #414: Pull request #714 opened by edkerk
3m 38s update-documentation
update-documentation
3m 38s
Revert "YAML I/O: quote with double quotes, matching Prettier's default" Tests #413: Pull request #713 opened by edkerk
3m 11s revert/yaml-double-quotes
revert/yaml-double-quotes
3m 11s
readYAMLmodel: fix quoted list items losing their quotes Tests #412: Pull request #712 opened by edkerk
3m 16s fix/list-item-quote-strip-order
fix/list-item-quote-strip-order
3m 16s
Remove writeFasta and processProteinFastaFile Tests #411: Pull request #711 opened by edkerk
2m 41s remove/writefasta-processproteinfastafile
remove/writefasta-processproteinfastafile
2m 41s
YAML I/O: quote with double quotes, matching Prettier's default Tests #410: Pull request #710 opened by edkerk
2m 57s fix/yaml-double-quotes
fix/yaml-double-quotes
2m 57s
readYAMLmodel: fix position-dependent metCharges/metComps defaults Tests #409: Pull request #709 opened by edkerk
2m 56s fix/metcharges-trailing-nan
fix/metcharges-trailing-nan
2m 56s